Browse AKAP4

Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Basic function annotation.
> Subcellular Location, Domain and Function
> Gene Ontology
> KEGG and Reactome Pathway
> Subcellular Location, Domain and Function
 
Subcellular Location Cell projection, cilium, flagellum Note=Localizes to the principle piece of the sperm flagellum.
Domain PF05716 A-kinase anchor protein 110 kDa (AKAP 110)
PF10522 RII binding domain
Function

Major structural component of sperm fibrous sheath. Plays a role in sperm motility.

> Gene Ontology
 
Biological Process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007338 single fertilization
GO:0009566 fertilization
GO:0010737 protein kinase A signaling
GO:0010738 regulation of protein kinase A signaling
GO:0010927 cellular component assembly involved in morphogenesis
GO:0030031 cell projection assembly
GO:0030317 flagellated sperm motility
GO:0042384 cilium assembly
GO:0044458 motile cilium assembly
GO:0044782 cilium organization
GO:0060271 cilium morphogenesis
GO:0097722 sperm motility
Molecular Function GO:0051018 protein kinase A binding
Cellular Component GO:0005929 cilium
GO:0005952 cAMP-dependent protein kinase complex
GO:0030016 myofibril
GO:0030017 sarcomere
GO:0030018 Z disc
GO:0031514 motile cilium
GO:0031674 I band
GO:0035686 sperm fibrous sheath
GO:0036126 sperm flagellum
GO:0043292 contractile fiber
GO:0044441 ciliary part
GO:0044449 contractile fiber part
GO:0061695 transferase complex, transferring phosphorus-containing groups
GO:0097223 sperm part
GO:0097228 sperm principal piece
GO:1902554 serine/threonine protein kinase complex
GO:1902911 protein kinase complex
> KEGG and Reactome Pathway
 
KEGG -
Reactome -
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Literatures that report relations between AKAP4 and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells.
> Text Mining
 

There is no record.

Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets.
> High-throughput Screening
  Statistical results of AKAP4 in screening data sets for detecting immune reponses.
PMID Screening System Cancer Type Cell Line Data Set Statistical Results Relation to immunity
29301958CRISPR-Cas9 melanomaB16F10Pmel-1 T cell NA/NSNA/NS
29301958CRISPR-Cas9 melanomaB16F10OT-1 T cell NA/NSNA/NS
28783722CRISPR-Cas9 melanomaMel6242CT-CRISPR NA/NSNA/NS
28723893CRISPR-Cas9 melanomaB16GVAX+Anti-PD1 NA/NSNA/NS
28723893CRISPR-Cas9 melanomaB16GVAX NA/NSNA/NS
25691366RNAiBreast cancerMCF7Luc-CTL assay NA/NSNA/NS
24476824shRNAmelanomaB16Primary screen NA/NSNA/NS
24476824shRNAmelanomaB16Secondary screen NA/NSNA/NS
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets.
> Expression difference between responders and non-responders
> Mutation difference between responders and non-responders
> Expression difference between responders and non-responders
 
Points in the above scatter plot represent the expression difference of AKAP4 in various data sets.
No PMID Cancer type Group Drug # Res # NRes Log2 (Fold Change) P value Anno
126997480MelanomaallAnti-PD-1 (pembrolizumab and nivolumab)141201
226997480MelanomaMAPKiAnti-PD-1 (pembrolizumab and nivolumab)6501
326997480Melanomanon-MAPKiAnti-PD-1 (pembrolizumab and nivolumab)8701
428552987Urothelial cancerallAnti-PD-L1 (atezolizumab) 916-2.0780.0146
528552987Urothelial cancersmokingAnti-PD-L1 (atezolizumab) 59-4.1850.000304
628552987Urothelial cancernon-smokingAnti-PD-L1 (atezolizumab) 470.5740.699
729033130MelanomaallAnti-PD-1 (nivolumab) 262301
829033130MelanomaNIV3-PROGAnti-PD-1 (nivolumab) 151101
929033130MelanomaNIV3-NAIVEAnti-PD-1 (nivolumab) 111201
1029301960Clear cell renal cell carcinoma (ccRCC)allAnti-PD-1 (nivolumab) 4801
1129301960Clear cell renal cell carcinoma (ccRCC)VEGFRiAnti-PD-1 (nivolumab) 2001
1229301960Clear cell renal cell carcinoma (ccRCC)non-VEGFRiAnti-PD-1 (nivolumab) 2801
1329443960Urothelial cancerallAnti-PD-L1 (atezolizumab) 682300.0650.584
> Mutation difference between responders and non-responders
 
Points in the above scatter plot represent the mutation difference of AKAP4 in various data sets.
No PMID Cancer type Group Drug # Res # NRes % Mut/Res % Mut/NRes % Diff (R vs NR) Pval Anno
125765070Non-small cell lung cancer (NSCLC)allAnti-PD-1 (pembrolizumab) 14177.107.10.452
225765070Non-small cell lung cancer (NSCLC)smokingAnti-PD-1 (pembrolizumab) 103100101
325765070Non-small cell lung cancer (NSCLC)non-smokingAnti-PD-1 (pembrolizumab) 4140001
426359337MelanomaallAnti-CTLA-4 (ipilimumab) 277314.82.712.10.0439
526359337MelanomaBRAFiAnti-CTLA-4 (ipilimumab) 0140001
626359337Melanomanon-BRAFiAnti-CTLA-4 (ipilimumab) 275914.83.411.40.0746
726997480MelanomaallAnti-PD-1 (pembrolizumab and nivolumab)21174.85.9-1.11
826997480MelanomaMAPKiAnti-PD-1 (pembrolizumab and nivolumab)860001
926997480Melanomanon-MAPKiAnti-PD-1 (pembrolizumab and nivolumab)13117.79.1-1.41
1028552987Urothelial cancerallAnti-PD-L1 (atezolizumab) 9160001
1128552987Urothelial cancersmokingAnti-PD-L1 (atezolizumab) 590001
1228552987Urothelial cancernon-smokingAnti-PD-L1 (atezolizumab) 470001
1329033130MelanomaallAnti-PD-1 (nivolumab) 38275.305.30.507
1429033130MelanomaNIV3-PROGAnti-PD-1 (nivolumab) 22134.504.51
1529033130MelanomaNIV3-NAIVEAnti-PD-1 (nivolumab) 16146.206.21
1629301960Clear cell renal cell carcinoma (ccRCC)allAnti-PD-1 (nivolumab) 11130001
1729301960Clear cell renal cell carcinoma (ccRCC)VEGFRiAnti-PD-1 (nivolumab) 610001
1829301960Clear cell renal cell carcinoma (ccRCC)non-VEGFRiAnti-PD-1 (nivolumab) 5120001
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of AKAP4. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene.
> Lymphocyte
 
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of AKAP4. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by AKAP4.
> Immunoinhibitor
> Immunostimulator
> MHC molecule
> Immunoinhibitor
 
> Immunostimulator
 
> MHC molecule
 
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of AKAP4. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene.
> Chemokine
> Receptor
> Chemokine
 
> Receptor
 
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Distribution of AKAP4 expression across immune and molecular subtypes.
> Immune subtype
> Molecular subtype
> Immune subtype
 
> Molecular subtype
 
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Associations between AKAP4 and clinical features.
> Overall survival analysis
> Cancer stage
> Tumor grade
> Overall survival
 
> Stage
 
> Grade
 
Summary
SymbolAKAP4
NameA kinase (PRKA) anchor protein 4
Aliases p82; hAKAP82; AKAP82; Fsc1; CT99; A-kinase anchor protein 82 kDa; testis-specific gene HI; protein kinase A ......
Chromosomal LocationXp11.2
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Drugs targeting AKAP4 collected from DrugBank database.
> Drugs from DrugBank database
 

There is no record.