Summary | |
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Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Basic function annotation. > Subcellular Location, Domain and Function > Gene Ontology > KEGG and Reactome Pathway |
Subcellular Location | Cytoplasm |
Domain |
PF05470 Eukaryotic translation initiation factor 3 subunit 8 N-terminus PF01399 PCI domain |
Function |
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression. |
Biological Process |
GO:0001731 formation of translation preinitiation complex GO:0006413 translational initiation GO:0006417 regulation of translation GO:0006446 regulation of translational initiation GO:0010608 posttranscriptional regulation of gene expression GO:0022613 ribonucleoprotein complex biogenesis GO:0022618 ribonucleoprotein complex assembly GO:0034248 regulation of cellular amide metabolic process GO:0071826 ribonucleoprotein complex subunit organization |
Molecular Function |
GO:0003743 translation initiation factor activity GO:0008135 translation factor activity, RNA binding GO:0031369 translation initiation factor binding |
Cellular Component |
GO:0005852 eukaryotic translation initiation factor 3 complex GO:0016282 eukaryotic 43S preinitiation complex GO:0033290 eukaryotic 48S preinitiation complex GO:0070993 translation preinitiation complex |
KEGG |
hsa03013 RNA transport |
Reactome | - |
Summary | |
---|---|
Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Literatures that report relations between EIF3CL and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells. |
There is no record. |
Summary | |
---|---|
Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets. |
> High-throughput Screening
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Statistical results of EIF3CL in screening data sets for detecting immune reponses.
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Summary | |
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Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets. > Expression difference between responders and non-responders > Mutation difference between responders and non-responders |
Points in the above scatter plot represent the expression difference of EIF3CL in various data sets.
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There is no record. |
Summary | |
---|---|
Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of EIF3CL. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene. |
Summary | |
---|---|
Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of EIF3CL. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by EIF3CL. > Immunoinhibitor > Immunostimulator > MHC molecule |
Summary | |
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Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of EIF3CL. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene. > Chemokine > Receptor |
Summary | |
---|---|
Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Distribution of EIF3CL expression across immune and molecular subtypes. > Immune subtype > Molecular subtype |
Summary | |
---|---|
Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Associations between EIF3CL and clinical features. > Overall survival analysis > Cancer stage > Tumor grade |
Summary | |
---|---|
Symbol | EIF3CL |
Name | eukaryotic translation initiation factor 3, subunit C-like |
Aliases | eukaryotic translation initiation factor 3, subunit 8, 110kDa-like; Eukaryotic translation initiation factor ...... |
Chromosomal Location | 16p11.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Drugs targeting EIF3CL collected from DrugBank database. |
There is no record. |