Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Basic function annotation. > Subcellular Location, Domain and Function > Gene Ontology > KEGG and Reactome Pathway |
Subcellular Location | Endoplasmic reticulum membrane Peripheral membrane protein Cytoplasmic side Note=Interacts with EPHA3 at the cell membrane. |
Domain |
PF00102 Protein-tyrosine phosphatase |
Function |
Tyrosine-protein phosphatase which acts as a regulator of endoplasmic reticulum unfolded protein response. Mediates dephosphorylation of EIF2AK3/PERK; inactivating the protein kinase activity of EIF2AK3/PERK. May play an important role in CKII- and p60c-src-induced signal transduction cascades. May regulate the EFNA5-EPHA3 signaling pathway which modulates cell reorganization and cell-cell repulsion. May also regulate the hepatocyte growth factor receptor signaling pathway through dephosphorylation of MET. |
Biological Process |
GO:0000187 activation of MAPK activity GO:0001933 negative regulation of protein phosphorylation GO:0001959 regulation of cytokine-mediated signaling pathway GO:0006469 negative regulation of protein kinase activity GO:0006470 protein dephosphorylation GO:0006984 ER-nucleus signaling pathway GO:0006986 response to unfolded protein GO:0006987 activation of signaling protein activity involved in unfolded protein response GO:0007254 JNK cascade GO:0007257 activation of JUN kinase activity GO:0007259 JAK-STAT cascade GO:0008286 insulin receptor signaling pathway GO:0009894 regulation of catabolic process GO:0009896 positive regulation of catabolic process GO:0016311 dephosphorylation GO:0018108 peptidyl-tyrosine phosphorylation GO:0018212 peptidyl-tyrosine modification GO:0030100 regulation of endocytosis GO:0030947 regulation of vascular endothelial growth factor receptor signaling pathway GO:0030948 negative regulation of vascular endothelial growth factor receptor signaling pathway GO:0030968 endoplasmic reticulum unfolded protein response GO:0031098 stress-activated protein kinase signaling cascade GO:0031329 regulation of cellular catabolic process GO:0031331 positive regulation of cellular catabolic process GO:0031532 actin cytoskeleton reorganization GO:0032069 regulation of nuclease activity GO:0032075 positive regulation of nuclease activity GO:0032147 activation of protein kinase activity GO:0032386 regulation of intracellular transport GO:0032801 receptor catabolic process GO:0032868 response to insulin GO:0032869 cellular response to insulin stimulus GO:0032872 regulation of stress-activated MAPK cascade GO:0032874 positive regulation of stress-activated MAPK cascade GO:0033157 regulation of intracellular protein transport GO:0033673 negative regulation of kinase activity GO:0033674 positive regulation of kinase activity GO:0034340 response to type I interferon GO:0034620 cellular response to unfolded protein GO:0034976 response to endoplasmic reticulum stress GO:0035335 peptidyl-tyrosine dephosphorylation GO:0035791 platelet-derived growth factor receptor-beta signaling pathway GO:0035966 response to topologically incorrect protein GO:0035967 cellular response to topologically incorrect protein GO:0036498 IRE1-mediated unfolded protein response GO:0036499 PERK-mediated unfolded protein response GO:0042326 negative regulation of phosphorylation GO:0043112 receptor metabolic process GO:0043405 regulation of MAP kinase activity GO:0043406 positive regulation of MAP kinase activity GO:0043407 negative regulation of MAP kinase activity GO:0043409 negative regulation of MAPK cascade GO:0043410 positive regulation of MAPK cascade GO:0043434 response to peptide hormone GO:0043506 regulation of JUN kinase activity GO:0043507 positive regulation of JUN kinase activity GO:0045088 regulation of innate immune response GO:0045860 positive regulation of protein kinase activity GO:0046328 regulation of JNK cascade GO:0046330 positive regulation of JNK cascade GO:0046626 regulation of insulin receptor signaling pathway GO:0046627 negative regulation of insulin receptor signaling pathway GO:0048008 platelet-derived growth factor receptor signaling pathway GO:0048010 vascular endothelial growth factor receptor signaling pathway GO:0048012 hepatocyte growth factor receptor signaling pathway GO:0050730 regulation of peptidyl-tyrosine phosphorylation GO:0050731 positive regulation of peptidyl-tyrosine phosphorylation GO:0051348 negative regulation of transferase activity GO:0051403 stress-activated MAPK cascade GO:0060337 type I interferon signaling pathway GO:0060338 regulation of type I interferon-mediated signaling pathway GO:0060396 growth hormone receptor signaling pathway GO:0060397 JAK-STAT cascade involved in growth hormone signaling pathway GO:0060416 response to growth hormone GO:0060627 regulation of vesicle-mediated transport GO:0060759 regulation of response to cytokine stimulus GO:0061097 regulation of protein tyrosine kinase activity GO:0061098 positive regulation of protein tyrosine kinase activity GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress GO:0070302 regulation of stress-activated protein kinase signaling cascade GO:0070304 positive regulation of stress-activated protein kinase signaling cascade GO:0070371 ERK1 and ERK2 cascade GO:0070372 regulation of ERK1 and ERK2 cascade GO:0070373 negative regulation of ERK1 and ERK2 cascade GO:0071357 cellular response to type I interferon GO:0071375 cellular response to peptide hormone stimulus GO:0071378 cellular response to growth hormone stimulus GO:0071417 cellular response to organonitrogen compound GO:0071900 regulation of protein serine/threonine kinase activity GO:0071901 negative regulation of protein serine/threonine kinase activity GO:0071902 positive regulation of protein serine/threonine kinase activity GO:0090287 regulation of cellular response to growth factor stimulus GO:0090288 negative regulation of cellular response to growth factor stimulus GO:0097193 intrinsic apoptotic signaling pathway GO:0097696 STAT cascade GO:1900076 regulation of cellular response to insulin stimulus GO:1900077 negative regulation of cellular response to insulin stimulus GO:1900101 regulation of endoplasmic reticulum unfolded protein response GO:1900102 negative regulation of endoplasmic reticulum unfolded protein response GO:1900103 positive regulation of endoplasmic reticulum unfolded protein response GO:1901652 response to peptide GO:1901653 cellular response to peptide GO:1902202 regulation of hepatocyte growth factor receptor signaling pathway GO:1902235 regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway GO:1902236 negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway GO:1902532 negative regulation of intracellular signal transduction GO:1903573 negative regulation of response to endoplasmic reticulum stress GO:1903894 regulation of IRE1-mediated unfolded protein response GO:1903896 positive regulation of IRE1-mediated unfolded protein response GO:1903897 regulation of PERK-mediated unfolded protein response GO:1903898 negative regulation of PERK-mediated unfolded protein response GO:1990264 peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity GO:2000644 regulation of receptor catabolic process GO:2000646 positive regulation of receptor catabolic process GO:2001233 regulation of apoptotic signaling pathway GO:2001234 negative regulation of apoptotic signaling pathway GO:2001242 regulation of intrinsic apoptotic signaling pathway GO:2001243 negative regulation of intrinsic apoptotic signaling pathway |
Molecular Function |
GO:0004721 phosphoprotein phosphatase activity GO:0004725 protein tyrosine phosphatase activity GO:0005158 insulin receptor binding GO:0016791 phosphatase activity GO:0019902 phosphatase binding GO:0019903 protein phosphatase binding GO:0030971 receptor tyrosine kinase binding GO:0042578 phosphoric ester hydrolase activity GO:0045296 cadherin binding GO:0046875 ephrin receptor binding GO:0050839 cell adhesion molecule binding GO:0051721 protein phosphatase 2A binding GO:0098631 protein binding involved in cell adhesion GO:0098632 protein binding involved in cell-cell adhesion GO:0098641 cadherin binding involved in cell-cell adhesion GO:1990782 protein tyrosine kinase binding |
Cellular Component |
GO:0005769 early endosome GO:0005913 cell-cell adherens junction GO:0097443 sorting endosome GO:0098552 side of membrane GO:0098554 cytoplasmic side of endoplasmic reticulum membrane GO:0098562 cytoplasmic side of membrane |
KEGG |
hsa04520 Adherens junction hsa04910 Insulin signaling pathway |
Reactome |
R-HSA-1280215: Cytokine Signaling in Immune system R-HSA-982772: Growth hormone receptor signaling R-HSA-109582: Hemostasis R-HSA-168256: Immune System R-HSA-354192: Integrin alphaIIb beta3 signaling R-HSA-913531: Interferon Signaling R-HSA-909733: Interferon alpha/beta signaling R-HSA-877300: Interferon gamma signaling R-HSA-6807004: Negative regulation of MET activity R-HSA-8849472: PTK6 Down-Regulation R-HSA-76009: Platelet Aggregation (Plug Formation) R-HSA-76002: Platelet activation, signaling and aggregation R-HSA-912694: Regulation of IFNA signaling R-HSA-877312: Regulation of IFNG signaling R-HSA-162582: Signal Transduction R-HSA-6806834: Signaling by MET R-HSA-8848021: Signaling by PTK6 |
Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Literatures that report relations between PTPN1 and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells. |
Literatures describing the relation between PTPN1 and anti-tumor immunity in human cancer.
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Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets. |
> High-throughput Screening
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Statistical results of PTPN1 in screening data sets for detecting immune reponses.
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Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets. > Expression difference between responders and non-responders > Mutation difference between responders and non-responders |
Points in the above scatter plot represent the expression difference of PTPN1 in various data sets.
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Points in the above scatter plot represent the mutation difference of PTPN1 in various data sets.
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Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of PTPN1. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene. |
Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of PTPN1. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by PTPN1. > Immunoinhibitor > Immunostimulator > MHC molecule |
Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of PTPN1. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene. > Chemokine > Receptor |
Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Distribution of PTPN1 expression across immune and molecular subtypes. > Immune subtype > Molecular subtype |
Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Associations between PTPN1 and clinical features. > Overall survival analysis > Cancer stage > Tumor grade |
Summary | |
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Symbol | PTPN1 |
Name | protein tyrosine phosphatase, non-receptor type 1 |
Aliases | PTP1B; protein tyrosine phosphatase, placental; protein-tyrosine phosphatase 1B; PTP-1B; Tyrosine-protein ph ...... |
Chromosomal Location | 20q13.1-q13.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Drugs targeting PTPN1 collected from DrugBank database. |
Details on drugs targeting PTPN1.
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