Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Basic function annotation. > Subcellular Location, Domain and Function > Gene Ontology > KEGG and Reactome Pathway |
Subcellular Location | Cytoplasm. Nucleus. Note=In neurons, translocates into the nucleus after treatment with angiotensin II (By similarity). Shuttles between the cytoplasm and nucleus via its association with PDPK1. |
Domain |
PF00017 SH2 domain PF00102 Protein-tyrosine phosphatase |
Function |
Modulates signaling by tyrosine phosphorylated cell surface receptors such as KIT and the EGF receptor/EGFR. The SH2 regions may interact with other cellular components to modulate its own phosphatase activity against interacting substrates. Together with MTUS1, induces UBE2V2 expression upon angiotensin II stimulation. Plays a key role in hematopoiesis. |
Biological Process |
GO:0000082 G1/S transition of mitotic cell cycle GO:0001501 skeletal system development GO:0001906 cell killing GO:0001909 leukocyte mediated cytotoxicity GO:0001933 negative regulation of protein phosphorylation GO:0001959 regulation of cytokine-mediated signaling pathway GO:0002228 natural killer cell mediated immunity GO:0002244 hematopoietic progenitor cell differentiation GO:0002250 adaptive immune response GO:0002429 immune response-activating cell surface receptor signaling pathway GO:0002443 leukocyte mediated immunity GO:0002449 lymphocyte mediated immunity GO:0002455 humoral immune response mediated by circulating immunoglobulin GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002521 leukocyte differentiation GO:0002683 negative regulation of immune system process GO:0002694 regulation of leukocyte activation GO:0002695 negative regulation of leukocyte activation GO:0002696 positive regulation of leukocyte activation GO:0002697 regulation of immune effector process GO:0002698 negative regulation of immune effector process GO:0002703 regulation of leukocyte mediated immunity GO:0002704 negative regulation of leukocyte mediated immunity GO:0002706 regulation of lymphocyte mediated immunity GO:0002707 negative regulation of lymphocyte mediated immunity GO:0002712 regulation of B cell mediated immunity GO:0002713 negative regulation of B cell mediated immunity GO:0002757 immune response-activating signal transduction GO:0002764 immune response-regulating signaling pathway GO:0002768 immune response-regulating cell surface receptor signaling pathway GO:0002819 regulation of adaptive immune response GO:0002820 negative regulation of adaptive immune response GO:0002822 regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002823 negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002889 regulation of immunoglobulin mediated immune response GO:0002890 negative regulation of immunoglobulin mediated immune response GO:0002920 regulation of humoral immune response GO:0002921 negative regulation of humoral immune response GO:0002923 regulation of humoral immune response mediated by circulating immunoglobulin GO:0002924 negative regulation of humoral immune response mediated by circulating immunoglobulin GO:0006469 negative regulation of protein kinase activity GO:0006470 protein dephosphorylation GO:0006816 calcium ion transport GO:0006874 cellular calcium ion homeostasis GO:0006875 cellular metal ion homeostasis GO:0006959 humoral immune response GO:0007159 leukocyte cell-cell adhesion GO:0007162 negative regulation of cell adhesion GO:0007204 positive regulation of cytosolic calcium ion concentration GO:0007346 regulation of mitotic cell cycle GO:0007596 blood coagulation GO:0007599 hemostasis GO:0010522 regulation of calcium ion transport into cytosol GO:0010959 regulation of metal ion transport GO:0014065 phosphatidylinositol 3-kinase signaling GO:0014066 regulation of phosphatidylinositol 3-kinase signaling GO:0014068 positive regulation of phosphatidylinositol 3-kinase signaling GO:0016064 immunoglobulin mediated immune response GO:0016311 dephosphorylation GO:0018108 peptidyl-tyrosine phosphorylation GO:0018212 peptidyl-tyrosine modification GO:0019724 B cell mediated immunity GO:0022407 regulation of cell-cell adhesion GO:0022408 negative regulation of cell-cell adhesion GO:0022409 positive regulation of cell-cell adhesion GO:0030098 lymphocyte differentiation GO:0030099 myeloid cell differentiation GO:0030168 platelet activation GO:0030183 B cell differentiation GO:0030219 megakaryocyte differentiation GO:0030220 platelet formation GO:0031294 lymphocyte costimulation GO:0031295 T cell costimulation GO:0032844 regulation of homeostatic process GO:0032845 negative regulation of homeostatic process GO:0032943 mononuclear cell proliferation GO:0032944 regulation of mononuclear cell proliferation GO:0032945 negative regulation of mononuclear cell proliferation GO:0033277 abortive mitotic cell cycle GO:0033627 cell adhesion mediated by integrin GO:0033628 regulation of cell adhesion mediated by integrin GO:0033630 positive regulation of cell adhesion mediated by integrin GO:0033673 negative regulation of kinase activity GO:0034109 homotypic cell-cell adhesion GO:0034340 response to type I interferon GO:0034762 regulation of transmembrane transport GO:0034765 regulation of ion transmembrane transport GO:0035335 peptidyl-tyrosine dephosphorylation GO:0035855 megakaryocyte development GO:0036344 platelet morphogenesis GO:0042098 T cell proliferation GO:0042110 T cell activation GO:0042113 B cell activation GO:0042129 regulation of T cell proliferation GO:0042130 negative regulation of T cell proliferation GO:0042267 natural killer cell mediated cytotoxicity GO:0042326 negative regulation of phosphorylation GO:0043405 regulation of MAP kinase activity GO:0043407 negative regulation of MAP kinase activity GO:0043409 negative regulation of MAPK cascade GO:0044770 cell cycle phase transition GO:0044772 mitotic cell cycle phase transition GO:0044843 cell cycle G1/S phase transition GO:0045088 regulation of innate immune response GO:0045577 regulation of B cell differentiation GO:0045619 regulation of lymphocyte differentiation GO:0045785 positive regulation of cell adhesion GO:0046651 lymphocyte proliferation GO:0048015 phosphatidylinositol-mediated signaling GO:0048017 inositol lipid-mediated signaling GO:0050670 regulation of lymphocyte proliferation GO:0050672 negative regulation of lymphocyte proliferation GO:0050730 regulation of peptidyl-tyrosine phosphorylation GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation GO:0050777 negative regulation of immune response GO:0050817 coagulation GO:0050851 antigen receptor-mediated signaling pathway GO:0050852 T cell receptor signaling pathway GO:0050853 B cell receptor signaling pathway GO:0050854 regulation of antigen receptor-mediated signaling pathway GO:0050855 regulation of B cell receptor signaling pathway GO:0050856 regulation of T cell receptor signaling pathway GO:0050858 negative regulation of antigen receptor-mediated signaling pathway GO:0050859 negative regulation of B cell receptor signaling pathway GO:0050860 negative regulation of T cell receptor signaling pathway GO:0050863 regulation of T cell activation GO:0050864 regulation of B cell activation GO:0050865 regulation of cell activation GO:0050866 negative regulation of cell activation GO:0050867 positive regulation of cell activation GO:0050868 negative regulation of T cell activation GO:0050870 positive regulation of T cell activation GO:0050878 regulation of body fluid levels GO:0050900 leukocyte migration GO:0051208 sequestering of calcium ion GO:0051209 release of sequestered calcium ion into cytosol GO:0051235 maintenance of location GO:0051238 sequestering of metal ion GO:0051249 regulation of lymphocyte activation GO:0051250 negative regulation of lymphocyte activation GO:0051251 positive regulation of lymphocyte activation GO:0051279 regulation of release of sequestered calcium ion into cytosol GO:0051282 regulation of sequestering of calcium ion GO:0051283 negative regulation of sequestering of calcium ion GO:0051348 negative regulation of transferase activity GO:0051480 regulation of cytosolic calcium ion concentration GO:0051924 regulation of calcium ion transport GO:0055074 calcium ion homeostasis GO:0060337 type I interferon signaling pathway GO:0060338 regulation of type I interferon-mediated signaling pathway GO:0060348 bone development GO:0060401 cytosolic calcium ion transport GO:0060402 calcium ion transport into cytosol GO:0060759 regulation of response to cytokine stimulus GO:0061515 myeloid cell development GO:0070371 ERK1 and ERK2 cascade GO:0070372 regulation of ERK1 and ERK2 cascade GO:0070486 leukocyte aggregation GO:0070489 T cell aggregation GO:0070509 calcium ion import GO:0070527 platelet aggregation GO:0070588 calcium ion transmembrane transport GO:0070661 leukocyte proliferation GO:0070663 regulation of leukocyte proliferation GO:0070664 negative regulation of leukocyte proliferation GO:0070838 divalent metal ion transport GO:0071357 cellular response to type I interferon GO:0071593 lymphocyte aggregation GO:0071900 regulation of protein serine/threonine kinase activity GO:0071901 negative regulation of protein serine/threonine kinase activity GO:0072503 cellular divalent inorganic cation homeostasis GO:0072507 divalent inorganic cation homeostasis GO:0072511 divalent inorganic cation transport GO:0090279 regulation of calcium ion import GO:0097553 calcium ion transmembrane import into cytosol GO:0098751 bone cell development GO:1901987 regulation of cell cycle phase transition GO:1901990 regulation of mitotic cell cycle phase transition GO:1902105 regulation of leukocyte differentiation GO:1902532 negative regulation of intracellular signal transduction GO:1902656 calcium ion import into cytosol GO:1902806 regulation of cell cycle G1/S phase transition GO:1903037 regulation of leukocyte cell-cell adhesion GO:1903038 negative regulation of leukocyte cell-cell adhesion GO:1903039 positive regulation of leukocyte cell-cell adhesion GO:1903169 regulation of calcium ion transmembrane transport GO:1903706 regulation of hemopoiesis GO:1904062 regulation of cation transmembrane transport GO:2000021 regulation of ion homeostasis GO:2000045 regulation of G1/S transition of mitotic cell cycle |
Molecular Function |
GO:0001784 phosphotyrosine binding GO:0004721 phosphoprotein phosphatase activity GO:0004725 protein tyrosine phosphatase activity GO:0005001 transmembrane receptor protein tyrosine phosphatase activity GO:0016791 phosphatase activity GO:0017124 SH3 domain binding GO:0019198 transmembrane receptor protein phosphatase activity GO:0042169 SH2 domain binding GO:0042578 phosphoric ester hydrolase activity GO:0045309 protein phosphorylated amino acid binding GO:0050839 cell adhesion molecule binding GO:0051219 phosphoprotein binding |
Cellular Component |
GO:0042101 T cell receptor complex GO:0042105 alpha-beta T cell receptor complex GO:0043235 receptor complex GO:0098802 plasma membrane receptor complex |
KEGG |
hsa04520 Adherens junction hsa04630 Jak-STAT signaling pathway hsa04650 Natural killer cell mediated cytotoxicity hsa04660 T cell receptor signaling pathway hsa04662 B cell receptor signaling pathway |
Reactome |
R-HSA-1280218: Adaptive Immune System R-HSA-983695: Antigen activates B Cell Receptor (BCR) leading to generation of second messengers R-HSA-5690714: CD22 mediated BCR regulation R-HSA-202733: Cell surface interactions at the vascular wall R-HSA-1500931: Cell-Cell communication R-HSA-388841: Costimulation by the CD28 family R-HSA-1280215: Cytokine Signaling in Immune system R-HSA-114604: GPVI-mediated activation cascade R-HSA-982772: Growth hormone receptor signaling R-HSA-109582: Hemostasis R-HSA-168256: Immune System R-HSA-168249: Innate Immune System R-HSA-913531: Interferon Signaling R-HSA-909733: Interferon alpha/beta signaling R-HSA-877300: Interferon gamma signaling R-HSA-912526: Interleukin receptor SHC signaling R-HSA-451927: Interleukin-2 signaling R-HSA-512988: Interleukin-3, 5 and GM-CSF signaling R-HSA-6798695: Neutrophil degranulation R-HSA-389948: PD-1 signaling R-HSA-210990: PECAM1 interactions R-HSA-76002: Platelet activation, signaling and aggregation R-HSA-418346: Platelet homeostasis R-HSA-432142: Platelet sensitization by LDL R-HSA-912694: Regulation of IFNA signaling R-HSA-877312: Regulation of IFNG signaling R-HSA-1433559: Regulation of KIT signaling R-HSA-162582: Signal Transduction R-HSA-391160: Signal regulatory protein (SIRP) family interactions R-HSA-449147: Signaling by Interleukins R-HSA-1433557: Signaling by SCF-KIT R-HSA-983705: Signaling by the B Cell Receptor (BCR) |
Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Literatures that report relations between PTPN6 and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells. |
Literatures describing the relation between PTPN6 and anti-tumor immunity in human cancer.
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Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets. |
> High-throughput Screening
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Statistical results of PTPN6 in screening data sets for detecting immune reponses.
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Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets. > Expression difference between responders and non-responders > Mutation difference between responders and non-responders |
Points in the above scatter plot represent the expression difference of PTPN6 in various data sets.
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Points in the above scatter plot represent the mutation difference of PTPN6 in various data sets.
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Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of PTPN6. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene. |
Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of PTPN6. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by PTPN6. > Immunoinhibitor > Immunostimulator > MHC molecule |
Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of PTPN6. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene. > Chemokine > Receptor |
Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Distribution of PTPN6 expression across immune and molecular subtypes. > Immune subtype > Molecular subtype |
Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Associations between PTPN6 and clinical features. > Overall survival analysis > Cancer stage > Tumor grade |
Summary | |
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Symbol | PTPN6 |
Name | protein tyrosine phosphatase, non-receptor type 6 |
Aliases | HCPH; PTP-1C; SHP-1; HPTP1C; SH-PTP1; SHP-1L; hematopoietic cell phosphatase; hematopoietic cell protein-tyr ...... |
Chromosomal Location | 12p13.31 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Drugs targeting PTPN6 collected from DrugBank database. |
There is no record. |