Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Basic function annotation. > Subcellular Location, Domain and Function > Gene Ontology > KEGG and Reactome Pathway |
Subcellular Location | Secreted. |
Domain |
PF00048 Small cytokines (intecrine/chemokine) |
Function |
Chemotactic activity for lymphocytes but not for monocytes or neutrophils. In thymus, mediates medullary accumulation of thymic dendritic cells and contributes to regulatoy T cell development, playing a role in self-tolerance establishment. |
Biological Process |
GO:0001818 negative regulation of cytokine production GO:0001819 positive regulation of cytokine production GO:0001906 cell killing GO:0001909 leukocyte mediated cytotoxicity GO:0001910 regulation of leukocyte mediated cytotoxicity GO:0001912 positive regulation of leukocyte mediated cytotoxicity GO:0001913 T cell mediated cytotoxicity GO:0001914 regulation of T cell mediated cytotoxicity GO:0001916 positive regulation of T cell mediated cytotoxicity GO:0002250 adaptive immune response GO:0002251 organ or tissue specific immune response GO:0002367 cytokine production involved in immune response GO:0002369 T cell cytokine production GO:0002377 immunoglobulin production GO:0002381 immunoglobulin production involved in immunoglobulin mediated immune response GO:0002385 mucosal immune response GO:0002426 immunoglobulin production in mucosal tissue GO:0002440 production of molecular mediator of immune response GO:0002443 leukocyte mediated immunity GO:0002449 lymphocyte mediated immunity GO:0002456 T cell mediated immunity GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002548 monocyte chemotaxis GO:0002637 regulation of immunoglobulin production GO:0002639 positive regulation of immunoglobulin production GO:0002683 negative regulation of immune system process GO:0002685 regulation of leukocyte migration GO:0002687 positive regulation of leukocyte migration GO:0002688 regulation of leukocyte chemotaxis GO:0002690 positive regulation of leukocyte chemotaxis GO:0002694 regulation of leukocyte activation GO:0002695 negative regulation of leukocyte activation GO:0002696 positive regulation of leukocyte activation GO:0002697 regulation of immune effector process GO:0002698 negative regulation of immune effector process GO:0002699 positive regulation of immune effector process GO:0002700 regulation of production of molecular mediator of immune response GO:0002701 negative regulation of production of molecular mediator of immune response GO:0002702 positive regulation of production of molecular mediator of immune response GO:0002703 regulation of leukocyte mediated immunity GO:0002704 negative regulation of leukocyte mediated immunity GO:0002705 positive regulation of leukocyte mediated immunity GO:0002706 regulation of lymphocyte mediated immunity GO:0002707 negative regulation of lymphocyte mediated immunity GO:0002708 positive regulation of lymphocyte mediated immunity GO:0002709 regulation of T cell mediated immunity GO:0002710 negative regulation of T cell mediated immunity GO:0002711 positive regulation of T cell mediated immunity GO:0002712 regulation of B cell mediated immunity GO:0002714 positive regulation of B cell mediated immunity GO:0002718 regulation of cytokine production involved in immune response GO:0002719 negative regulation of cytokine production involved in immune response GO:0002720 positive regulation of cytokine production involved in immune response GO:0002724 regulation of T cell cytokine production GO:0002725 negative regulation of T cell cytokine production GO:0002726 positive regulation of T cell cytokine production GO:0002819 regulation of adaptive immune response GO:0002820 negative regulation of adaptive immune response GO:0002821 positive regulation of adaptive immune response GO:0002822 regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002823 negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002824 positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002825 regulation of T-helper 1 type immune response GO:0002826 negative regulation of T-helper 1 type immune response GO:0002827 positive regulation of T-helper 1 type immune response GO:0002828 regulation of type 2 immune response GO:0002830 positive regulation of type 2 immune response GO:0002889 regulation of immunoglobulin mediated immune response GO:0002891 positive regulation of immunoglobulin mediated immune response GO:0006816 calcium ion transport GO:0006874 cellular calcium ion homeostasis GO:0006875 cellular metal ion homeostasis GO:0007159 leukocyte cell-cell adhesion GO:0007162 negative regulation of cell adhesion GO:0007204 positive regulation of cytosolic calcium ion concentration GO:0009615 response to virus GO:0010522 regulation of calcium ion transport into cytosol GO:0010524 positive regulation of calcium ion transport into cytosol GO:0010818 T cell chemotaxis GO:0010819 regulation of T cell chemotaxis GO:0010820 positive regulation of T cell chemotaxis GO:0010959 regulation of metal ion transport GO:0016064 immunoglobulin mediated immune response GO:0019724 B cell mediated immunity GO:0022407 regulation of cell-cell adhesion GO:0022408 negative regulation of cell-cell adhesion GO:0022409 positive regulation of cell-cell adhesion GO:0030335 positive regulation of cell migration GO:0030593 neutrophil chemotaxis GO:0030595 leukocyte chemotaxis GO:0031341 regulation of cell killing GO:0031343 positive regulation of cell killing GO:0031349 positive regulation of defense response GO:0032103 positive regulation of response to external stimulus GO:0032609 interferon-gamma production GO:0032613 interleukin-10 production GO:0032623 interleukin-2 production GO:0032649 regulation of interferon-gamma production GO:0032653 regulation of interleukin-10 production GO:0032663 regulation of interleukin-2 production GO:0032689 negative regulation of interferon-gamma production GO:0032703 negative regulation of interleukin-2 production GO:0032733 positive regulation of interleukin-10 production GO:0032844 regulation of homeostatic process GO:0032845 negative regulation of homeostatic process GO:0032846 positive regulation of homeostatic process GO:0032943 mononuclear cell proliferation GO:0032944 regulation of mononuclear cell proliferation GO:0032945 negative regulation of mononuclear cell proliferation GO:0032946 positive regulation of mononuclear cell proliferation GO:0034341 response to interferon-gamma GO:0034612 response to tumor necrosis factor GO:0034762 regulation of transmembrane transport GO:0034764 positive regulation of transmembrane transport GO:0034765 regulation of ion transmembrane transport GO:0034767 positive regulation of ion transmembrane transport GO:0035710 CD4-positive, alpha-beta T cell activation GO:0035711 T-helper 1 cell activation GO:0035739 CD4-positive, alpha-beta T cell proliferation GO:0035740 CD8-positive, alpha-beta T cell proliferation GO:0035743 CD4-positive, alpha-beta T cell cytokine production GO:0035744 T-helper 1 cell cytokine production GO:0035745 T-helper 2 cell cytokine production GO:0035746 granzyme A production GO:0035747 natural killer cell chemotaxis GO:0035754 B cell chemotaxis GO:0035782 mature natural killer cell chemotaxis GO:0036037 CD8-positive, alpha-beta T cell activation GO:0040017 positive regulation of locomotion GO:0042088 T-helper 1 type immune response GO:0042092 type 2 immune response GO:0042098 T cell proliferation GO:0042102 positive regulation of T cell proliferation GO:0042110 T cell activation GO:0042129 regulation of T cell proliferation GO:0042130 negative regulation of T cell proliferation GO:0043270 positive regulation of ion transport GO:0043410 positive regulation of MAPK cascade GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity GO:0045785 positive regulation of cell adhesion GO:0046631 alpha-beta T cell activation GO:0046633 alpha-beta T cell proliferation GO:0046634 regulation of alpha-beta T cell activation GO:0046635 positive regulation of alpha-beta T cell activation GO:0046636 negative regulation of alpha-beta T cell activation GO:0046640 regulation of alpha-beta T cell proliferation GO:0046641 positive regulation of alpha-beta T cell proliferation GO:0046642 negative regulation of alpha-beta T cell proliferation GO:0046651 lymphocyte proliferation GO:0048247 lymphocyte chemotaxis GO:0050670 regulation of lymphocyte proliferation GO:0050671 positive regulation of lymphocyte proliferation GO:0050672 negative regulation of lymphocyte proliferation GO:0050727 regulation of inflammatory response GO:0050729 positive regulation of inflammatory response GO:0050777 negative regulation of immune response GO:0050863 regulation of T cell activation GO:0050865 regulation of cell activation GO:0050866 negative regulation of cell activation GO:0050867 positive regulation of cell activation GO:0050868 negative regulation of T cell activation GO:0050870 positive regulation of T cell activation GO:0050900 leukocyte migration GO:0050920 regulation of chemotaxis GO:0050921 positive regulation of chemotaxis GO:0051090 regulation of sequence-specific DNA binding transcription factor activity GO:0051208 sequestering of calcium ion GO:0051209 release of sequestered calcium ion into cytosol GO:0051235 maintenance of location GO:0051238 sequestering of metal ion GO:0051249 regulation of lymphocyte activation GO:0051250 negative regulation of lymphocyte activation GO:0051251 positive regulation of lymphocyte activation GO:0051272 positive regulation of cellular component movement GO:0051279 regulation of release of sequestered calcium ion into cytosol GO:0051281 positive regulation of release of sequestered calcium ion into cytosol GO:0051282 regulation of sequestering of calcium ion GO:0051283 negative regulation of sequestering of calcium ion GO:0051480 regulation of cytosolic calcium ion concentration GO:0051924 regulation of calcium ion transport GO:0051928 positive regulation of calcium ion transport GO:0055074 calcium ion homeostasis GO:0060326 cell chemotaxis GO:0060401 cytosolic calcium ion transport GO:0060402 calcium ion transport into cytosol GO:0070098 chemokine-mediated signaling pathway GO:0070371 ERK1 and ERK2 cascade GO:0070372 regulation of ERK1 and ERK2 cascade GO:0070374 positive regulation of ERK1 and ERK2 cascade GO:0070486 leukocyte aggregation GO:0070489 T cell aggregation GO:0070509 calcium ion import GO:0070555 response to interleukin-1 GO:0070588 calcium ion transmembrane transport GO:0070661 leukocyte proliferation GO:0070663 regulation of leukocyte proliferation GO:0070664 negative regulation of leukocyte proliferation GO:0070665 positive regulation of leukocyte proliferation GO:0070670 response to interleukin-4 GO:0070838 divalent metal ion transport GO:0071346 cellular response to interferon-gamma GO:0071347 cellular response to interleukin-1 GO:0071353 cellular response to interleukin-4 GO:0071356 cellular response to tumor necrosis factor GO:0071559 response to transforming growth factor beta GO:0071560 cellular response to transforming growth factor beta stimulus GO:0071593 lymphocyte aggregation GO:0071604 transforming growth factor beta production GO:0071613 granzyme B production GO:0071621 granulocyte chemotaxis GO:0071622 regulation of granulocyte chemotaxis GO:0071624 positive regulation of granulocyte chemotaxis GO:0071634 regulation of transforming growth factor beta production GO:0071636 positive regulation of transforming growth factor beta production GO:0071661 regulation of granzyme B production GO:0071663 positive regulation of granzyme B production GO:0071674 mononuclear cell migration GO:0072503 cellular divalent inorganic cation homeostasis GO:0072507 divalent inorganic cation homeostasis GO:0072511 divalent inorganic cation transport GO:0072676 lymphocyte migration GO:0072678 T cell migration GO:0072679 thymocyte migration GO:0090022 regulation of neutrophil chemotaxis GO:0090023 positive regulation of neutrophil chemotaxis GO:0090279 regulation of calcium ion import GO:0090280 positive regulation of calcium ion import GO:0097529 myeloid leukocyte migration GO:0097530 granulocyte migration GO:0097553 calcium ion transmembrane import into cytosol GO:1901623 regulation of lymphocyte chemotaxis GO:1902622 regulation of neutrophil migration GO:1902624 positive regulation of neutrophil migration GO:1902656 calcium ion import into cytosol GO:1903037 regulation of leukocyte cell-cell adhesion GO:1903038 negative regulation of leukocyte cell-cell adhesion GO:1903039 positive regulation of leukocyte cell-cell adhesion GO:1903169 regulation of calcium ion transmembrane transport GO:1904062 regulation of cation transmembrane transport GO:1904064 positive regulation of cation transmembrane transport GO:1904427 positive regulation of calcium ion transmembrane transport GO:1990266 neutrophil migration GO:2000021 regulation of ion homeostasis GO:2000147 positive regulation of cell motility GO:2000401 regulation of lymphocyte migration GO:2000403 positive regulation of lymphocyte migration GO:2000404 regulation of T cell migration GO:2000406 positive regulation of T cell migration GO:2000410 regulation of thymocyte migration GO:2000412 positive regulation of thymocyte migration GO:2000501 regulation of natural killer cell chemotaxis GO:2000503 positive regulation of natural killer cell chemotaxis GO:2000511 regulation of granzyme A production GO:2000513 positive regulation of granzyme A production GO:2000514 regulation of CD4-positive, alpha-beta T cell activation GO:2000515 negative regulation of CD4-positive, alpha-beta T cell activation GO:2000516 positive regulation of CD4-positive, alpha-beta T cell activation GO:2000517 regulation of T-helper 1 cell activation GO:2000518 negative regulation of T-helper 1 cell activation GO:2000537 regulation of B cell chemotaxis GO:2000538 positive regulation of B cell chemotaxis GO:2000551 regulation of T-helper 2 cell cytokine production GO:2000553 positive regulation of T-helper 2 cell cytokine production GO:2000554 regulation of T-helper 1 cell cytokine production GO:2000556 positive regulation of T-helper 1 cell cytokine production GO:2000557 regulation of immunoglobulin production in mucosal tissue GO:2000558 positive regulation of immunoglobulin production in mucosal tissue GO:2000561 regulation of CD4-positive, alpha-beta T cell proliferation GO:2000562 negative regulation of CD4-positive, alpha-beta T cell proliferation GO:2000563 positive regulation of CD4-positive, alpha-beta T cell proliferation GO:2000564 regulation of CD8-positive, alpha-beta T cell proliferation GO:2000566 positive regulation of CD8-positive, alpha-beta T cell proliferation GO:2001185 regulation of CD8-positive, alpha-beta T cell activation GO:2001187 positive regulation of CD8-positive, alpha-beta T cell activation |
Molecular Function |
GO:0001664 G-protein coupled receptor binding GO:0005125 cytokine activity GO:0005126 cytokine receptor binding GO:0008009 chemokine activity GO:0042379 chemokine receptor binding GO:0048020 CCR chemokine receptor binding |
Cellular Component | - |
KEGG |
hsa04060 Cytokine-cytokine receptor interaction |
Reactome |
R-HSA-380108: Chemokine receptors bind chemokines R-HSA-373076: Class A/1 (Rhodopsin-like receptors) R-HSA-416476: G alpha (q) signalling events R-HSA-388396: GPCR downstream signaling R-HSA-500792: GPCR ligand binding R-HSA-881907: Gastrin-CREB signalling pathway via PKC and MAPK R-HSA-375276: Peptide ligand-binding receptors R-HSA-162582: Signal Transduction R-HSA-372790: Signaling by GPCR |
Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Literatures that report relations between XCL1 and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells. |
There is no record. |
Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets. |
> High-throughput Screening
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Statistical results of XCL1 in screening data sets for detecting immune reponses.
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Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets. > Expression difference between responders and non-responders > Mutation difference between responders and non-responders |
Points in the above scatter plot represent the expression difference of XCL1 in various data sets.
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Points in the above scatter plot represent the mutation difference of XCL1 in various data sets.
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Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of XCL1. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene. |
Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of XCL1. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by XCL1. > Immunoinhibitor > Immunostimulator > MHC molecule |
Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of XCL1. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene. > Chemokine > Receptor |
Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Distribution of XCL1 expression across immune and molecular subtypes. > Immune subtype > Molecular subtype |
Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Associations between XCL1 and clinical features. > Overall survival analysis > Cancer stage > Tumor grade |
Summary | |
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Symbol | XCL1 |
Name | chemokine (C motif) ligand 1 |
Aliases | LPTN; ATAC; SCM-1a; SCM-1; lymphotactin; LTN; SCYC1; small inducible cytokine subfamily C, member 1 (lymphot ...... |
Chromosomal Location | 1q24.2 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Drugs targeting XCL1 collected from DrugBank database. |
There is no record. |